Structure of PDB 5irl Chain A

Receptor sequence
>5irlA (length=744) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
EAAACKKYMSKLRTIVAAQSRFLNLCLEDIYTENTLEVRTAALGLEELFS
DADTVLVVGEAGSGKSTLLQQVHLLWATGQDFQEFLFVFPFSCRQLQCVA
RPLSVMTLLFEHCCWPDVGQQDVFQFLLDHPDRILLTFDGFDEFKFKFTD
HERHCSPTDPTSVQTLLFNLLQGNLLKNARKVLTSRPDAVSAFLRKYVRT
EFNLKGFSEEGIELYLRKCHREPGVADRLIHLLQTTSALHGLCHLPVFSW
MVSKCHQELLLQDGGSPKTTTDMYLLILQHFLRHASLLQGRLPTLLRLGQ
LALWGLGMCCYVFSAQQLQAAQVDPDDISLGFLVQAPLEFLHITFQCFLA
AFYLVLSTDVPTASLRYLFNCSTVAALLQKTEPHNLQITAAFLAGLLSRE
HRDLLAACQASERSLLRRRACARWCLARSLHKHFRSIPAMPGFLWLIRSL
YEMQEERLAQEAVRGLNVEHLKLTFCGVGPAECAALAFVLRHLRRPVALQ
LDHNSVGDIGVEQLLPCLGACKALYLRDNNISDRGICKLIEHALHCEQLQ
KLALFNNKLTDGCAHSVAQLLACKQNFLALRLGNNHITAEGAQVLAEGLR
DNSSLQFLGFWGNKVGDKGAQALAEALSDHQSLKWLSLVGNNIGSVGAQA
LASMLEKNVALEELCLAANHLQDAGVCSLAEGLKRNSSLKVLKLSNNCIT
FVGAEALLQALASNDTILEVWLRGNPFSPEEMEALSHRDSRLLL
3D structure
PDB5irl Crystal structure of NOD2 and its implications in human disease.
ChainA
Resolution3.09 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A Y232 T233 G282 G284 K285 S286 T287 Y435 P466 W470 H583 Y31 T32 G62 G64 K65 S66 T67 Y215 P246 W250 H342
External links
PDB RCSB:5irl, PDBe:5irl, PDBj:5irl
PDBsum5irl
PubMed27283905
UniProtG1T469|NOD2_RABIT Nucleotide-binding oligomerization domain-containing protein 2 (Gene Name=NOD2)

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