Structure of PDB 5idy Chain A

Receptor sequence
>5idyA (length=262) Species: 269482 (Burkholderia vietnamiensis G4) [Search protein sequence]
HHHMDLGIAGKTALVCAASKGLGRGCAEALAAEGVNLVIVARTRDTLERT
ADEIRAASNVSVATVACDITTPDGRAAALAACPQPDILVNNAGGPPPGDF
RDFSHDDWIRALESNMLTPIELIRATVDGMIARGFGRIVNITSSAVKAPI
DVLALSNGARSGLTGFVAGLARKVVGQGVTINNLLPGLFDTDRIATTLAA
AANAQGVTVDELRARRTRDIPAGRLGTRAEFGAACAFLCSVHAGYITGQN
WLLDGGAYPGTF
3D structure
PDB5idy Crystal structure of an oxidoreductase from Burkholderia vietnamiensis in complex with NADP
ChainA
Resolution1.85 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) N137 S153 R157 A197
Catalytic site (residue number reindexed from 1) N140 S156 R160 A200
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 NAP A A14 S16 K17 G18 L19 A38 R39 T40 C64 D65 I66 N88 A89 G90 G91 S140 R157 P183 G184 L185 F186 T188 R190 A17 S19 K20 G21 L22 A41 R42 T43 C67 D68 I69 N91 A92 G93 G94 S143 R160 P186 G187 L188 F189 T191 R193
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding

View graph for
Molecular Function
External links
PDB RCSB:5idy, PDBe:5idy, PDBj:5idy
PDBsum5idy
PubMed
UniProtA4JGH3

[Back to BioLiP]