Structure of PDB 5i39 Chain A

Receptor sequence

>5i39A (length=383) Species: 585 (Proteus vulgaris) [Search protein sequence]

EGRFVPGTPRHGFVEGTEGALPKQADVVVVGAGILGIMTAINLVERGLSV
VIVEKGNIAGEQSSRFYGQAISYKMPDETFLLHHLGKHRWREMNAKVGID
TTYRTQGRVEVPLDEEDLVNVRKWIDERSKNVGSDIPFKTRIIEGAELNQ
RLRGATTDWKIAGFEEDSGSFDPEVATFVMAEYAKKMGVRIYTQCAARGL
ETQAGVISDVVTEKGAIKTSQVVVAGGVWSRLFMQNLNVDVPTLPAYQSQ
QLISGSPTAPGGNVALPGGIFFREQADGTYATSPRVIVALPDLPELNASL
EKLKAEFPAFKESKLIDQWSGAMAIAPDENPIISEVKEYPGLVINTATGW
GMTESPVSAELTADLLLGKKPVLDPKPFSLYRF

3D structure

PDB

5i39 Crystal structure of a membrane-bound l-amino acid deaminase from Proteus vulgaris

Chain

Resolution

1.2 Å

3D
structure

Catalytic site residues are labeled in the structure
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Enzymatic activity

Catalytic site (original residue number in PDB)	F96 Q99 A100 Q278 P297
Catalytic site (residue number reindexed from 1)	F66 Q69 A70 Q248 P267
Enzyme Commision number	?

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	FAD	A	V60 G61 G63 I64 L65 V83 E84 K85 Q92 S93 F96 Y97 Q99 A226 A227 G256 G257 W259 Q278 Q280 G409 M411 T436 G437 W438 G439 M440 T441	V30 G31 G33 I34 L35 V53 E54 K55 Q62 S63 F66 Y67 Q69 A196 A197 G226 G227 W229 Q248 Q250 G321 M323 T348 G349 W350 G351 M352 T353

External links

PDB	RCSB:5i39, PDBe:5i39, PDBj:5i39
PDBsum	5i39
PubMed	27422658
UniProt	Q9LCB2

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