Structure of PDB 5hod Chain A

Receptor sequence
>5hodA (length=61) Species: 9606 (Homo sapiens) [Search protein sequence]
GAKRPRTTITAKQLETLKNAYKNSPKPARHVREQLSSETGLDMRVVQVWF
QNRRAKEKRLK
3D structure
PDB5hod Impact of cytosine methylation on DNA binding specificities of human transcription factors.
ChainA
Resolution2.682 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A R87 R89 I92 V131 N135 R4 R6 I9 V48 N52
BS02 dna A R89 K109 Q130 Q134 R137 K141 R6 K26 Q47 Q51 R54 K58
Gene Ontology
Molecular Function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5hod, PDBe:5hod, PDBj:5hod
PDBsum5hod
PubMed28473536
UniProtQ969G2|LHX4_HUMAN LIM/homeobox protein Lhx4 (Gene Name=LHX4)

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