Structure of PDB 5h9y Chain A

Receptor sequence
>5h9yA (length=412) Species: 343517 (Paenibacillus barengoltzii) [Search protein sequence]
ADFTQGADVSGNNVTLWFKSSVNTTWVDVHYKVNSGVQQNVRMSFNAGAA
RFEHTILTAAQAEIEYFFTYNNGVPAYDTTTFTYRTNSIYSIPASSIPQP
SEGGVSLKVMNGTGGAYTDDQIYWGVIGINPVNGKWSYLDLAGRLLPISS
DLNNAPGHLTKDGINYANIYHKISDANWVNLPKIESGRLFLSVGSPLYMK
TFDDGFAGPDLNNPTDPNLNIIFDFVAFTVDKDGYHGNTTRVDQFGFPIQ
HRLVNLAGNYDRTVGELESETRSGLFAKYVNEVPYEFKSLGTLQAPYRIL
SPMKGPFQEGGAYENYFAGYSSISTQDILLGVGEASNPEVCAALNRHVYT
EPDNWNRVDQYYQAAPANYYAKFWHDHSIDGLAYGFCYDDVNGQAAYLEV
GDPKGLIVRVGW
3D structure
PDB5h9y The recognition mechanism of triple-helical beta-1,3-glucan by a beta-1,3-glucanase
ChainA
Resolution1.969 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.39: glucan endo-1,3-beta-D-glucosidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 BGC A E194 S195 T238 E185 S186 T229
BS02 BGC A S195 G196 R197 A236 F237 S186 G187 R188 A227 F228
BS03 BGC A D240 H245 D231 H236
BS04 BGC A F237 T238 N247 F228 T229 N238
BS05 BGC A T249 V251 Y393 C396 T240 V242 Y384 C387
BS06 BGC A L339 G340 C396 Y397 L330 G331 C387 Y388
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0042973 glucan endo-1,3-beta-D-glucosidase activity

View graph for
Molecular Function
External links
PDB RCSB:5h9y, PDBe:5h9y, PDBj:5h9y
PDBsum5h9y
PubMed28787048
UniProtA0A1S4NYE2

[Back to BioLiP]