Structure of PDB 5gws Chain A

Receptor sequence
>5gwsA (length=233) Species: 1428 (Bacillus thuringiensis) [Search protein sequence]
IIMISGANSGIGHACIKYFLEKSFHVIALDINNNNLIDYMKTDMPLKVVQ
IDLSNSEAIHNLFTQLDLEKLSPDILINAAGIREITPVLHLSDDMFKKVI
DVNLVAPFILSREVAKRWCESKIKGCIVNIASVSGLMAEPERAAYVASKH
ALIGLTKQMAMEFGKQNIRVNSISPGVIRTELTALMSMIKSNQSLDTWGL
PQDIVSCIEYLISDQARFITGSNFVIDGGWTAG
3D structure
PDB5gws Engineering a short-chain dehydrogenase/reductase for the stereoselective production of (2S,3R,4S)-4-hydroxyisoleucine with three asymmetric centers.
ChainA
Resolution2.35 Å
3D
structure
Catalytic site residues are labeled in the structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD A G11 S14 G15 I16 D35 I36 I56 L58 A84 G86 I87 I135 A136 S137 Y150 K154 P180 G181 I183 T185 L187 T188 G6 S9 G10 I11 D30 I31 I51 L53 A79 G81 I82 I130 A131 S132 Y145 K149 P175 G176 I178 T180 L182 T183
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Wed Feb 26 15:06:20 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5gws', asym_id = 'A', title = 'Engineering a short-chain dehydrogenase/reductas...hydroxyisoleucine with three asymmetric centers. '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5gws', asym_id='A', title='Engineering a short-chain dehydrogenase/reductas...hydroxyisoleucine with three asymmetric centers. ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0016491', uniprot = '', pdbid = '5gws', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016491', uniprot='', pdbid='5gws', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>