Structure of PDB 5gwr Chain A

Receptor sequence
>5gwrA (length=243) Species: 1428 (Bacillus thuringiensis) [Search protein sequence]
NKIIMISGANSGIGHACIKYFLEKSFHVIALDINNNNLIDYMKTDMPLKV
VQIDLSNSEAIHNLFTQLDLEKLSPDILINAAGIREITPVLHLSDDMFKK
VIDVNLVAPFILSREVAKRWCESKIKGCIVNIASVSGLMAEPERAAYVAS
KHALIGLTKQMAMEFGKQNIRVNSISPGVIRTELTEEYFSNKALMSMIKS
NQSLDTWGLPQDIVSCIEYLISDQARFITGSNFVIDGGWTAGK
3D structure
PDB5gwr Engineering a short-chain dehydrogenase/reductase for the stereoselective production of (2S,3R,4S)-4-hydroxyisoleucine with three asymmetric centers
ChainA
Resolution2.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NAD A G11 S14 G15 I16 D35 I36 I56 L58 A84 G86 I87 I135 S137 Y150 K154 P180 G181 I183 T185 L187 T188 G8 S11 G12 I13 D32 I33 I53 L55 A81 G83 I84 I132 S134 Y147 K151 P177 G178 I180 T182 L184 T185
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Dec 1 08:37:16 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1443                 pubmed=display_regular_ligand(pdbid,asym_id,lig3,ligIdx,title)
   1444         else:
=> 1445             pubmed,uniprot=display_protein_receptor(pdbid,asym_id,title)
   1446     
   1447     uniprot_line=''
pubmed = '', uniprot = '', display_protein_receptor = <function display_protein_receptor>, pdbid = '5gwr', asym_id = 'A', title = 'Engineering a short-chain dehydrogenase/reductas...-hydroxyisoleucine with three asymmetric centers '
 /var/www/html/BioLiP/pdb.cgi in display_protein_receptor(pdbid='5gwr', asym_id='A', title='Engineering a short-chain dehydrogenase/reductas...-hydroxyisoleucine with three asymmetric centers ')
    839 
    840     if go:
=>  841         display_go(go,uniprot,pdbid,asym_id)
    842     return pubmed,uniprot
    843 
global display_go = <function display_go>, go = '0016491', uniprot = '', pdbid = '5gwr', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016491', uniprot='', pdbid='5gwr', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>