Structure of PDB 5gsr Chain A

Receptor sequence
>5gsrA (length=274) Species: 10090 (Mus musculus) [Search protein sequence]
GPHSLRYFVTAVSRPGLGEPRFIAVGYVDDTQFVRFDSDADNPRFEPRAP
WMEQEGPEYWEEQTQRAKSDEQWFRVSLRTAQRYYNQSKGGSHTFQRMFG
CDVGSDWRLLRGYQQFAYDGRDYIALNEDLKTWTAADTAALITRRKWEQA
GDAEYYRAYLEGECVEWLRRYLELGNETLLRTDSPKAHVTYHPRSQVDVT
LRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGTFQKWAAVVVP
LGKEQNYTCHVHHKGLPEPLTLRW
3D structure
PDB5gsr Protective T Cell Responses Featured by Concordant Recognition of Middle East Respiratory Syndrome Coronavirus-Derived CD8+ T Cell Epitopes and Host MHC.
ChainA
Resolution2.198 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 V9 Y59 Q63 R66 D70 W73 S77 A81 Y84 F95 R97 T143 K146 W147 D152 Y155 Y156 Y159 W167 Y171 Y7 V9 Y59 Q63 R66 D70 W73 S77 A81 Y84 F95 R97 T143 K146 W147 D152 Y155 Y156 Y159 W167 Y171
External links
PDB RCSB:5gsr, PDBe:5gsr, PDBj:5gsr
PDBsum5gsr
PubMed27903740
UniProtP01902|HA1D_MOUSE H-2 class I histocompatibility antigen, K-D alpha chain (Gene Name=H2-K1)

[Back to BioLiP]