Structure of PDB 5gop Chain A

Receptor sequence
>5gopA (length=447) Species: 103690 (Nostoc sp. PCC 7120 = FACHB-418) [Search protein sequence]
RETESWKLLESSIIYYEGNPIGTVAAQDPELAALNYDQCFLRDFVPSAFV
FLMDGQTDIVRNFLIETLTLQSHEKEMDCFQPGAGLMPASFKVESDGSKE
YLVADFGEKAIARVPPVDSCMWWILLLRAYEKATGDLTLAREPKFQAGIK
LILDLCLAHRFSMYPTMLVPDGAFMIDRRMGVYEHPLEIQVLFYAALRAA
RELLLPDGDGEQYLNKVHGRLGALQYHIRNYYWVDLKRLREIYRYKGNEF
GKEIANKFNIFSQSIPDWVIEWLPEKGGYLAGNLGPGRMDFRFFALGNLM
AILAGLASEEESQRIMNLFAHRWEDLIGYMPVKICYPALQGLEWQIVTGC
DPKNIPWSYHNGGNWPVLLWLFTAAALKTGKVELAHEAIAIAEGRLSNDK
FPEYYDGNNGRLIGKEARIYQTWSIAGLLVAKQFLANPDHVEFISFP
3D structure
PDB5gop Structural Analysis of the Catalytic Mechanism and Substrate Specificity of Anabaena Alkaline Invertase InvA Reveals a Novel Glucosidase
ChainA
Resolution2.35 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.26: beta-fructofuranosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GLC A Y47 F51 R53 D54 M186 D188 Y370 H371 Y36 F40 R42 D43 M175 D177 Y359 H360
BS02 FRU A N46 Y47 A121 I122 D188 R189 Y370 N35 Y36 A110 I111 D177 R178 Y359
Gene Ontology
Molecular Function
GO:0004564 beta-fructofuranosidase activity
GO:0004575 sucrose alpha-glucosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0033926 endo-alpha-N-acetylgalactosaminidase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0005987 sucrose catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5gop, PDBe:5gop, PDBj:5gop
PDBsum5gop
PubMed27777307
UniProtQ8YWS9

[Back to BioLiP]