Structure of PDB 5gm8 Chain A

Receptor sequence
>5gm8A (length=170) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
QSMMLDRIRVVLVNTSHPGNIGGAARAMKNMGLSQLVLVQPESFPHGDAV
ARASGATDILDAARVVDTLEEALSGCSVVLGTSARDRRIPWPLLDPRECA
TTCLEHLEANGEVALVFGREYAGLTNEELQRCQFHVHIPSDPEFGSLNLA
AAVQVLTYEVRMAWLAAQGK
3D structure
PDB5gm8 Methylation at position 32 of tRNA catalyzed by TrmJ alters oxidative stress response in Pseudomonas aeruginosa.
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.1.1.200: tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SFG A T79 S80 A81 R82 F114 G115 R116 E117 H134 I135 L144 A149 T82 S83 A84 R85 F117 G118 R119 E120 H137 I138 L147 A152
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0008173 RNA methyltransferase activity
Biological Process
GO:0006396 RNA processing

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Molecular Function
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Biological Process
External links
PDB RCSB:5gm8, PDBe:5gm8, PDBj:5gm8
PDBsum5gm8
PubMed27683218
UniProtA0A072ZPM2

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