Structure of PDB 5ggl Chain A

Receptor sequence
>5gglA (length=155) Species: 9606 (Homo sapiens) [Search protein sequence]
PRRVLDVEVYSSRSKVYVAVDGTTVLEDEAREQGRGIHVIVLNQATGHVM
AKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKDTAKALLR
SLGSQAGPALGWRDTWAFVGRKGGPVFGEKHSKSPALSSWGDPVLLKTDV
PLSSA
3D structure
PDB5ggl Carbohydrate-binding domain of the POMGnT1 stem region modulates O-mannosylation sites of alpha-dystroglycan
ChainA
Resolution1.27 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 6ZC A R129 D179 E180 R207 R35 D85 E86 R113 MOAD: Kd=16.52mM
PDBbind-CN: -logKd/Ki=1.78,Kd=16.52mM
External links
PDB RCSB:5ggl, PDBe:5ggl, PDBj:5ggl
PDBsum5ggl
PubMed27493216
UniProtQ8WZA1|PMGT1_HUMAN Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 (Gene Name=POMGNT1)

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