Structure of PDB 5fvn Chain A

Receptor sequence
>5fvnA (length=342) Species: 550 (Enterobacter cloacae) [Search protein sequence]
AEIYNKDGNKLDLYGKVDGLHYFSDDDSQDGDQTYMRLGFKGETQVNDQL
TGYGQWEYQIQGNSGENENNSWTRVAFAGLKFGDAGSFDYGRNYGVVYDV
TSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNSDFFGLVDGLNFAVQYQ
GKNGSASGEDQTNNGRTELRQNGDGVGGSITYNLGEGFGIGTAVSSSKRT
SSQNDLTYGNGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGNLGWAN
KAQNFEVVAQYQFDFGLRPSVAYLQSKGKDLENGYGDQDLLKYVDVGATY
YFNKNMSTYVDYKINLLDDKEFTRNAGISTDDIVALGLVYQF
3D structure
PDB5fvn Gram-negative trimeric porins have specific LPS binding sites that are essential for porin biogenesis.
ChainA
Resolution1.45 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 Z9M A D174 K198 D174 K198
BS02 C8E A N204 G211 N204 G211
BS03 C8E A F188 Y223 F188 Y223
BS04 C8E A Q29 F110 D113 K313 Q29 F110 D113 K313
BS05 C8E A Y35 Q61 W72 E109 Y35 Q61 W72 E109
Gene Ontology
Molecular Function
GO:0015288 porin activity
GO:0046872 metal ion binding
Biological Process
GO:0006811 monoatomic ion transport
GO:0034220 monoatomic ion transmembrane transport
Cellular Component
GO:0009279 cell outer membrane
GO:0016020 membrane
GO:0046930 pore complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5fvn, PDBe:5fvn, PDBj:5fvn
PDBsum5fvn
PubMed27493217
UniProtQ93K99

[Back to BioLiP]