Structure of PDB 5fvk Chain A

Receptor sequence
>5fvkA (length=82) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNP
KSKDLIRAKFTEYLNRAEQLKKHLESEEANAA
3D structure
PDB5fvk Structural Fine-Tuning of Mit Interacting Motif 2 (Mim2) and Allosteric Regulation of Escrt-III by Vps4 in Yeast.
ChainA
Resolution1.658 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.6.4.6: vesicle-fusing ATPase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A T3 L7 I18 D21 Y46 E47 K48 N49 K51 S52 K59 Y63 R66 T3 L7 I18 D21 Y46 E47 K48 N49 K51 S52 K59 Y63 R66
BS02 peptide A K51 L55 K59 K51 L55 K59
External links
PDB RCSB:5fvk, PDBe:5fvk, PDBj:5fvk
PDBsum5fvk
PubMed27075672
UniProtP52917|VPS4_YEAST Vacuolar protein sorting-associated protein 4 (Gene Name=VPS4)

[Back to BioLiP]