Structure of PDB 5fuq Chain A
Receptor sequence
>5fuqA (length=273) Species:
9606
(Homo sapiens) [
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MVGRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPI
ISRKDITGKLKDPANFQYPAESVLAYKEGRLSPDIVAEQKKLEAADLVIF
QFPLQWFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTG
GSGSMYSLQGIHGDMNVILWPIQSGILHFCGFQVLEPQLTYSIGHTPADA
RIQILEGWKKRLENIWDETPLYFAPSSLFDLNFQAGFLMKKEVQDEEKNK
KFGLSVGHHLGKSIPTDNQIKAR
3D structure
PDB
5fuq
Identification of Novel Structural Hot-Spots for the Correction of Functional and Stability Defects in a Cancer-Associated Polymorphic Nadph:Quinone Oxidoreductase 1 from Sequence-Alignment Statistics.
Chain
A
Resolution
2.04 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB)
G150 Y156 H162
Catalytic site (residue number reindexed from 1)
G150 Y156 H162
Enzyme Commision number
1.6.5.2
: NAD(P)H dehydrogenase (quinone).
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
FAD
A
H12 S17 F18 N19 A21 P103 L104 Q105 W106 F107 T148 T149 G150 G151 Y156 I193 R201 L205
H12 S17 F18 N19 A21 P103 L104 Q105 W106 F107 T148 T149 G150 G151 Y156 I193 R201 L205
BS02
DTC
A
W106 G150 G151 M155 H162
W106 G150 G151 M155 H162
BS03
DTC
A
G150 H195
G150 H195
BS04
DTC
A
Y127 Y129 F179 F233 F237
Y127 Y129 F179 F233 F237
Gene Ontology
Molecular Function
GO:0003723
RNA binding
GO:0003955
NAD(P)H dehydrogenase (quinone) activity
GO:0004128
cytochrome-b5 reductase activity, acting on NAD(P)H
GO:0004784
superoxide dismutase activity
GO:0005515
protein binding
GO:0008753
NADPH dehydrogenase (quinone) activity
GO:0016491
oxidoreductase activity
GO:0042802
identical protein binding
GO:0050136
NADH:ubiquinone reductase (non-electrogenic) activity
Biological Process
GO:0000209
protein polyubiquitination
GO:0002931
response to ischemia
GO:0006116
NADH oxidation
GO:0006743
ubiquinone metabolic process
GO:0006801
superoxide metabolic process
GO:0006805
xenobiotic metabolic process
GO:0006809
nitric oxide biosynthetic process
GO:0006979
response to oxidative stress
GO:0007271
synaptic transmission, cholinergic
GO:0007584
response to nutrient
GO:0009410
response to xenobiotic stimulus
GO:0009636
response to toxic substance
GO:0009725
response to hormone
GO:0009743
response to carbohydrate
GO:0014070
response to organic cyclic compound
GO:0014075
response to amine
GO:0019430
removal of superoxide radicals
GO:0030163
protein catabolic process
GO:0032355
response to estradiol
GO:0032496
response to lipopolysaccharide
GO:0033574
response to testosterone
GO:0034599
cellular response to oxidative stress
GO:0042177
negative regulation of protein catabolic process
GO:0042360
vitamin E metabolic process
GO:0042373
vitamin K metabolic process
GO:0043066
negative regulation of apoptotic process
GO:0043279
response to alkaloid
GO:0043525
positive regulation of neuron apoptotic process
GO:0045087
innate immune response
GO:0045454
cell redox homeostasis
GO:0045471
response to ethanol
GO:0051602
response to electrical stimulus
GO:0070301
cellular response to hydrogen peroxide
GO:0070995
NADPH oxidation
GO:0071248
cellular response to metal ion
GO:0110076
negative regulation of ferroptosis
GO:1904772
response to tetrachloromethane
GO:1904844
response to L-glutamine
GO:1904880
response to hydrogen sulfide
GO:1905395
response to flavonoid
Cellular Component
GO:0005634
nucleus
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0030425
dendrite
GO:0043025
neuronal cell body
GO:0045202
synapse
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5fuq
,
PDBe:5fuq
,
PDBj:5fuq
PDBsum
5fuq
PubMed
28911204
UniProt
P15559
|NQO1_HUMAN NAD(P)H dehydrogenase [quinone] 1 (Gene Name=NQO1)
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