Structure of PDB 5fkp Chain A

Receptor sequence
>5fkpA (length=265) Species: 10090 (Mus musculus) [Search protein sequence]
KNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQ
GKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMDYPIEIQLSAGCEMYNAS
ESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQM
LLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSSAHRQLVCHVSGFY
PKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACR
VKHSSLGGQDIILYW
3D structure
PDB5fkp Structure of an Alpha-Helical Peptide and Lipopeptide Bound to the Non-Classical Mhc Class I Molecule Cd1D
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A K65 H68 M69 V72 Y73 S76 F77 D80 P146 D153 T156 T159 M162 K60 H63 M64 V67 Y68 S71 F72 D75 P134 D141 T144 T147 M150
BS02 FUC A S114 G130 N165 S102 G118 N153
External links
PDB RCSB:5fkp, PDBe:5fkp, PDBj:5fkp
PDBsum5fkp
PubMed27006394
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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