Structure of PDB 5f5w Chain A

Receptor sequence
>5f5wA (length=283) Species: 224324 (Aquifex aeolicus VF5) [Search protein sequence]
MYFQDIIMTLHKFWAEKGCLIWQPYDVEVGAGTMNPATFLKVLGKKPWNV
AYVEPSRRPQDGRYGENPNRLQHYYQFQVILKPAPRNPQEIYLESLERLG
INPLEHDIRFVEDDWESPTLGAWGLGWEVWLDGMEITQFTYFQQAGGLDL
DEISVEITYGLERIAMYIQDKDSVFDIEWKEGITYGEIFKRSEWEWSKYN
FELADTDMLFQVYEMFEKESKRMVEEGLIFPAYDYLLKCSHVFNILDARG
AISVQERARYIRRMNNLAREIAKLYLQVFENVG
3D structure
PDB5f5w Structural Insights into the Polyphyletic Origins of Glycyl tRNA Synthetases.
ChainA
Resolution2.81 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.1.1.14: glycine--tRNA ligase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 G5A A R58 D61 N69 R70 L71 Y74 W115 I136 Q138 E156 T158 G160 R163 R58 D61 N69 R70 L71 Y74 W115 I136 Q138 E156 T158 G160 R163
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004820 glycine-tRNA ligase activity
GO:0005524 ATP binding
Biological Process
GO:0006412 translation
GO:0006426 glycyl-tRNA aminoacylation
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:5f5w, PDBe:5f5w, PDBj:5f5w
PDBsum5f5w
PubMed27226617
UniProtO67081|SYGA_AQUAE Glycine--tRNA ligase alpha subunit (Gene Name=glyQ)

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