Structure of PDB 5f5q Chain A

Receptor sequence
>5f5qA (length=237) Species: 28958 (Canavalia cathartica) [Search protein sequence]
ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTA
HIIYNSVGKRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLY
KETNTILSWSFTSKLKSNSTHETNALHFVFNQFSKDQKDLILQGDATTGT
DGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFDATFTFLIK
SPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
3D structure
PDB5f5q Structural characterization of a lectin from Canavalia virosa seeds with inflammatory and cytotoxic activities.
ChainA
Resolution2.52 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A D10 Y12 N14 D19 D10 Y12 N14 D19
BS02 MN A E8 D10 D19 H24 E8 D10 D19 H24
BS03 MMA A Y12 G98 L99 Y100 A207 D208 R228 Y12 G98 L99 Y100 A207 D208 R228
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0005536 D-glucose binding
GO:0005537 D-mannose binding
GO:0030145 manganese ion binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
Biological Process
GO:0042311 vasodilation

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Molecular Function
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Biological Process
External links
PDB RCSB:5f5q, PDBe:5f5q, PDBj:5f5q
PDBsum5f5q
PubMed27737777
UniProtC0HJY1|CONV_CANCT Concanavalin V

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