Structure of PDB 5f54 Chain A

Receptor sequence
>5f54A (length=693) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
PAHWLLAPPASRDALLATMREWQVSPPVAQVLCGRDLRTELLALPLELTP
NPALREAARHIVAAVREGKRIRIHGDYDADGVSATATLVLGLRAIGANVH
GFIPHRLNEGYGIHPDRVPEHAAAADLVVTVDCGVSNLDEVKSLLATGTE
VVVTDHHAPGENFPECLVVHPHLTPDYDPDRHNLTGAGVAYHLLWAVYEE
LGRPEPRALLPLATLGTVADVAPLLGENRALVRAGLAEMARTELPGLRAL
MNEKRVRQPTARDVAFILAPRINAAGRMGEADRALELLTTPSDHEAKSLA
AYLEIRNQERRKIQDDMFAQALQLADPNDPALVLTHDDWHAGVMGIVASK
LVETFNRPVYIVAQGKGSVRSTPGISAVQGLRESRDLLGRFGGHPGAAGF
SLDPQNFGALRERIHGYVRQFPTPVPAVRLDAPLPVAALTPELLSELSIL
EPFGEGNPRPLWHLRGPLTDTRLVGKQGDVLQFRFGGVKGMKYSERDDAA
GERDVAAELALLELHAAALRPLAPLALAGTEEGLPTLPRLNPREAMTFLK
TGAAAYAEQGVATYLRDNVPGLTLLDTNAPHPGGDLILYGLPPESALRRW
LHEAQEQGGRVAFALGPKTLAELDAALTLAKLLPDSHTEAAQEAAADAYR
SWQWAHHYRVLNDAGWSASVYAMLGLPVPAALPKAAEALALAA
3D structure
PDB5f54 Structural basis for DNA 5 -end resection by RecJ
ChainA
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN A D79 D81 D135 D76 D78 D132
BS02 MN A D83 D135 H159 D223 D80 D132 H156 D220
BS03 TMP A R109 Y114 R280 S371 R373 G395 G396 A401 G402 R106 Y111 R277 S368 R370 G392 G393 A398 G399
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004527 exonuclease activity
GO:0008409 5'-3' exonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0006310 DNA recombination

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Molecular Function
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Biological Process
External links
PDB RCSB:5f54, PDBe:5f54, PDBj:5f54
PDBsum5f54
PubMed27058167
UniProtD0EM60

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