Structure of PDB 5f3w Chain A

Receptor sequence
>5f3wA (length=352) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence]
HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGD
LFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLAL
LKDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKN
YKKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIHKRILERFNDGI
LAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDIECREF
VEVNIKDKKSFNEAVNKIERCKNKPVVFGKIKREFKPWFDTLKDKILINK
AIIVDDNIKELLVDYANRQGIDGDLVLSLYKALLNNENWKELLDEYYNTK
FR
3D structure
PDB5f3w ATP-dependent DNA binding, unwinding, and resection by the Mre11/Rad50 complex
ChainA
Resolution3.11 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A D8 H10 D49 H188 D9 H11 D50 H189
BS02 MG A D49 N84 H158 H186 D50 N85 H159 H187
Gene Ontology
Molecular Function
GO:0000403 Y-form DNA binding
GO:0003677 DNA binding
GO:0004519 endonuclease activity
GO:0004527 exonuclease activity
GO:0004529 DNA exonuclease activity
GO:0008408 3'-5' exonuclease activity
GO:0016787 hydrolase activity
GO:0030145 manganese ion binding
GO:0042802 identical protein binding
GO:0045027 DNA end binding
GO:0046872 metal ion binding
Biological Process
GO:0006281 DNA repair
GO:0006302 double-strand break repair

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Molecular Function
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Biological Process
External links
PDB RCSB:5f3w, PDBe:5f3w, PDBj:5f3w
PDBsum5f3w
PubMed26717941
UniProtQ58719|MRE11_METJA DNA double-strand break repair protein Mre11 (Gene Name=mre11)

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