Structure of PDB 5f1n Chain A

Receptor sequence
>5f1nA (length=275) Species: 9615 (Canis lupus familiaris) [Search protein sequence]
GSHSLRYFYTSVSRPGRGDPRFIAVGYVDDTQFVRFDSDAATGRTEPRAP
WVEQEGPEYWDGETRKVKETAQVYRVDLDTLRGYYNQSEAGSHTIQTMYG
CDLGPGGRLLRGYRQDAYDGADYIALNEDLRSWTAADTAAQITRRKWEAA
GVAELQWRNYLETTCVEWLQRYLEMGKETLLRAEPPSTRVTRHPISDHEV
TLRCWALGFYPAEITLTWQRDGEDQTQDTEVVDTRPAGDGTFQKWAAVVV
PSGQEQRYTCHVQHEGLVEPVTRRW
3D structure
PDB5f1n Diversified Anchoring Features the Peptide Presentation of DLA-88*50801: First Structural Insight into Domestic Dog MHC Class I
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 Y9 E58 Y59 E63 K66 V67 T70 V73 D77 Y84 Y99 R114 D116 T143 K146 W147 V152 Q156 W157 Y160 W168 Y172 Y7 Y9 E58 Y59 E63 K66 V67 T70 V73 D77 Y84 Y99 R114 D116 T143 K146 W147 V152 Q156 W157 Y160 W168 Y172
Gene Ontology
Biological Process
GO:0002474 antigen processing and presentation of peptide antigen via MHC class I
Cellular Component
GO:0016020 membrane
GO:0030670 phagocytic vesicle membrane
GO:0042612 MHC class I protein complex
GO:0098553 lumenal side of endoplasmic reticulum membrane

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Biological Process
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Cellular Component
External links
PDB RCSB:5f1n, PDBe:5f1n, PDBj:5f1n
PDBsum5f1n
PubMed27511732
UniProtJ9UGS3

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