Structure of PDB 5efi Chain A

Receptor sequence
>5efiA (length=263) Species: 10090 (Mus musculus) [Search protein sequence]
KNYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQ
GKLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMDYPIEIQLSAGCEMYAS
ESFLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQM
LLNDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVDGHRQLVCHVSGFYPK
PVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVK
HSSLGGQDIILYW
3D structure
PDB5efi Structure of an alpha-Helical Peptide and Lipopeptide Bound to the Nonclassical Major Histocompatibility Complex (MHC) Class I Molecule CD1d.
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A K65 H68 M69 V72 Y73 S76 F77 R79 D80 D153 T159 L163 K60 H63 M64 V67 Y68 S71 F72 R74 D75 D141 T147 L151
BS02 FUC A S114 G130 N165 S102 G118 N153
External links
PDB RCSB:5efi, PDBe:5efi, PDBj:5efi
PDBsum5efi
PubMed27006394
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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