Structure of PDB 5ee3 Chain A

Receptor sequence
>5ee3A (length=357) Species: 39947 (Oryza sativa Japonica Group) [Search protein sequence]
ERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNE
ARVYVPDERFDWLCQLYKPKSEVSAYLEINDIALGNAFLSHIRAVDGIFH
VLRAFEDKDSVDPVRDLETIGEELRLKDIEFVQNKIDDLEKSMKRSNDKQ
LKLEHELCEKVKAHLEDGKDVRFGDWKSADIEILNTFQLLTAKPVVYLVN
MSEKDYQRKKNKFLPKIHAWVQEHGGETIIPFSCAFERLLADMPPDEAAK
YCAENQIASVIPKIIKTGFAAIHLIYFFTAGPDEVKCWQIRRQTKAPQAA
GTIHTDFERGFICAEVMKFDDLKELGSESAVKAAGKYRQEGKTYVVQDGD
IIFFKFN
3D structure
PDB5ee3 ATP binding by the P-loop NTPase OsYchF1 (an unconventional G protein) contributes to biotic but not abiotic stress responses
ChainA
Resolution2.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.5.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ANP A P33 N34 G36 K37 S38 T39 F129 N230 M231 P20 N21 G23 K24 S25 T26 F105 N200 M201
BS02 MG A S38 D94 S25 D81
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0005525 GTP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
GO:0043023 ribosomal large subunit binding
GO:0046872 metal ion binding
Biological Process
GO:0009651 response to salt stress
GO:1900425 negative regulation of defense response to bacterium
GO:1901001 negative regulation of response to salt stress
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005886 plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ee3, PDBe:5ee3, PDBj:5ee3
PDBsum5ee3
PubMed26912459
UniProtQ6Z1J6|OLA1_ORYSJ Obg-like ATPase 1 (Gene Name=YCHF1)

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