Structure of PDB 5e69 Chain A

Receptor sequence
>5e69A (length=73) Species: 9606 (Homo sapiens) [Search protein sequence]
PKLCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDK
IRRKNCPACRYRKCLQAGMNLEA
3D structure
PDB5e69 Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
ChainA
Resolution1.85 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 dna A C431 H432 Y433 K442 K446 C14 H15 Y16 K25 K29 PDBbind-CN: Kd=17uM
BS02 dna A S440 F444 R447 R470 K471 R477 S23 F27 R30 R53 K54 R60 PDBbind-CN: Kd=17uM
BS03 ZN A C421 C424 C441 C4 C7 C24
BS04 ZN A C457 C463 C473 C476 C40 C46 C56 C59
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5e69, PDBe:5e69, PDBj:5e69
PDBsum5e69
PubMed29626214
UniProtP04150|GCR_HUMAN Glucocorticoid receptor (Gene Name=NR3C1)

[Back to BioLiP]