Structure of PDB 5e62 Chain A

Receptor sequence
>5e62A (length=424) Species: 1173138 (Influenza D virus (D/swine/Oklahoma/1334/2011)) [Search protein sequence]
ELICIVQRVNESFSLHSGFGGNVYSMKTEPMTGFTNVTKGASVINQKDWI
GFGDARTDLTNDQFPASSDVPLAVAKKFRSLSGASLMLSAFGPPGKVDYL
YQGCGKEKVFYEGVNWSPEAGIDCFGSNWTQTKKDFYSRIYEAARSSTCM
TLVNSLDTKISSTTATAGTASSCSSSWMKSPLWYAESSVNPPQVCGTEQS
ATFTLPTSFGIYKCNKHVVQLCYFVYENKAKFNTFGCGDYYQNYYDGNGN
LIGGMDNRVAAYRGIANAGVKIECPSKILNPGTYSIKSTPRFLLVPKRSY
CFDTDGGYPIQVVQSEWSASRRSDNATEEACLQTEGCIFIKKTTPYVGEA
ADNAGDIEMRQLLSGLGNNDTVCVSQSGYTKGETPFVKDYLSPPKYGRCQ
LKTDSGRIPTLPSGLIIPQAGTDS
3D structure
PDB5e62 An Open Receptor-Binding Cavity of Hemagglutinin-Esterase-Fusion Glycoprotein from Newly-Identified Influenza D Virus: Basis for Its Broad Cell Tropism
ChainA
Resolution2.203 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.1.53: sialate O-acetylesterase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 5N6 A F127 T171 A172 W185 Y231 F240 F297 F125 T169 A170 W183 Y226 F235 F292
Gene Ontology
Molecular Function
GO:0016788 hydrolase activity, acting on ester bonds
GO:0046789 host cell surface receptor binding
Biological Process
GO:0019064 fusion of virus membrane with host plasma membrane
Cellular Component
GO:0019031 viral envelope

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5e62, PDBe:5e62, PDBj:5e62
PDBsum5e62
PubMed26816272
UniProtK9LG83

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