Structure of PDB 5dq9 Chain A

Receptor sequence
>5dq9A (length=218) Species: 10090 (Mus musculus) [Search protein sequence]
EVQLVESGGDLVKPGGSLKLSCAGSGITFSGYGMSWVRQTPDKSLEWVAL
ISNGGSYAYYSDSVKGRFTISRDNAKNTLYLQMSSLRSDDTAIYYCARHK
GLRGGTNAMDYWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCL
VKGYFPESVTVTWNSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSETVTC
SVAHPASSTTVDKKLEPS
3D structure
PDB5dq9 Lipid A-antibody structures reveal a widely-utilized pocket specific for negatively charged groups derived from from unrelated V-genes
ChainA
Resolution1.95 Å
3D
structure
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Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GN1 A S52 G53 S55 S52 G54 S56
BS02 GN4 A I51 S52 H95 G100A T100B N100C I51 S52 H99 G105 T106 N107
External links