Structure of PDB 5dnu Chain A

Receptor sequence
>5dnuA (length=267) Species: 68872 (Striga hermonthica) [Search protein sequence]
RVEAARNVHIVGSGDTTVVLGHGFGTDQSVWKHLVPYLVDSYRVLLYDNM
GAGSTNPEYFHFERYSTLQGYAHDLLVILHEFNIRSCIFVGHSLSAMTGA
IASIIRPDLFQKIVMLSASPRFLNTADYLGGFEPADVEQLAGAIEANYKS
WVSGFAPMVVGGDMDSVAVQEFSRTLFNMRPDIARSVFRTIFTSDLRDYL
GRVTVPCHIIQSSRDMAVPVSVAGYIHNRVGGRSVVEVMNTEGHLPQLSA
PEVAIPVLLRHIKNDID
3D structure
PDB5dnu Structural basis of unique ligand specificity of KAI2-like protein from parasitic weed Striga hermonthica
ChainA
Resolution1.2 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) F26 S95 L96 R216 G245
Catalytic site (residue number reindexed from 1) F24 S93 L94 R214 G243
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 KKN A F26 F124 L142 F157 I193 F194 A219 H246 F24 F122 L140 F155 I191 F192 A217 H244 MOAD: Kd=77.6uM
PDBbind-CN: -logKd/Ki=4.11,Kd=77.6uM
Gene Ontology
Biological Process
GO:0080167 response to karrikin

View graph for
Biological Process
External links
PDB RCSB:5dnu, PDBe:5dnu, PDBj:5dnu
PDBsum5dnu
PubMed27507097
UniProtA0A0M3PN85

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