Structure of PDB 5dm4 Chain A

Receptor sequence

>5dm4A (length=257) Species: 536229 (Bacillus pumilus ATCC 7061) [Search protein sequence]

IQEKIKELEVKRALAQSWFSDPDKRKISSNYDNRETPFTRFLSAETFTSY
YQLTFKKTPVSILDIGCGQGQMLEYISKQLPLADLTGIDSSEEAIHCANK
LNIKANFICTDIKNFSSHAKIYDVILIHLCFGLFENPIELLEQLLPYLSN
ESMIYIVDLNRDSIESGLSSVQSKEEELYIYDQYHASLTLSEFEQLLTYI
TKPREDMMYKIGTSIIGGFSPFSMEFLSLIGNGNLQQTLRQAPDQYVLLH
AWLIKNR

3D structure

PDB

5dm4 Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin.

Chain

Resolution

1.75 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	SAH	A	Q17 F20 R41 G67 D90 S91 D112 I113 H129 F135	Q16 F19 R40 G66 D89 S90 D111 I112 H128 F134
BS02	5DA	A	D33 T37 T40 L130 D159 L160 Y180 I181 Q184 Y247	D32 T36 T39 L129 D158 L159 Y179 I180 Q183 Y246

External links

PDB	RCSB:5dm4, PDBe:5dm4, PDBj:5dm4
PDBsum	5dm4
PubMed	25635336

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