Structure of PDB 5dfs Chain A

Receptor sequence
>5dfsA (length=104) Species: 9511 (Ateles sp.) [Search protein sequence]
GDVEKGKRIFIMKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQASGFTYTE
ANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFVGIKKKEERADLIAYLKK
ATNE
3D structure
PDB5dfs Disruption of a hydrogen bond network in human versus spider monkey cytochrome c affects heme crevice stability.
ChainA
Resolution1.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEC A K13 C14 C17 H18 G29 P30 G41 Y48 T49 N52 W59 Y67 L68 T78 K79 M80 F82 K13 C14 C17 H18 G29 P30 G41 Y48 T49 N52 W59 Y67 L68 T78 K79 M80 F82
Gene Ontology
Molecular Function
GO:0009055 electron transfer activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
GO:0006915 apoptotic process
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
Cellular Component
GO:0005739 mitochondrion
GO:0005758 mitochondrial intermembrane space
GO:0005829 cytosol

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Molecular Function
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Cellular Component
External links
PDB RCSB:5dfs, PDBe:5dfs, PDBj:5dfs
PDBsum5dfs
PubMed26775610
UniProtP00003|CYC_ATESP Cytochrome c (Gene Name=CYCS)

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