Structure of PDB 5deq Chain A

Receptor sequence
>5deqA (length=214) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence]
MKNYYSSNPTFYLGIDCIIFGFNEGEISLLLLKRNFEPAMGEWSLMGGFV
QKDESVDDAAKRVLAELTGLENVYMEQVGAFGAIDRDPGERVVSIAYYAL
ININEYDRELVQKHNAYWVNINELPALIFDHPEMVDKAREMMKQKASVEP
IGFNLLPKLFTLSQLQSLYEAIYGEPMDKRNFRKRVAEMDFIEKTDKIDK
RGAALYKFNGKAYR
3D structure
PDB5deq A novel transcriptional regulator of L-arabinose utilization in human gut bacteria.
ChainA
Resolution1.95 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 ARA A D16 R34 G47 F49 R86 D87 H131 D16 R34 G47 F49 R86 D87 H131
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity

View graph for
Molecular Function
External links
PDB RCSB:5deq, PDBe:5deq, PDBj:5deq
PDBsum5deq
PubMed26438537
UniProtQ8AAV8

[Back to BioLiP]