Structure of PDB 5deo Chain A

Receptor sequence
>5deoA (length=189) Species: 561007 (Mycobacteroides abscessus ATCC 19977) [Search protein sequence]
ERRRLGVMGGTFDPIHNGHLVAASEVADRFALDEVIFVPTGQGRKVSPAE
HRYLMTVIATASNPRFTVSRADIDRGGATYTVDTLTDLRTAHPDADLYFI
TGADALASILSWENWEQLFTLAKFIGVSRPGYELSSDHIAHADGLSLVEV
PALAISSTDCRIRAGQARPIWYLVPDGVVQYVAKHRLYS
3D structure
PDB5deo Mycobacterium abscessus NadD in complex with nicotinic acid adenine dinucleotide
ChainA
Resolution2.22 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.7.18: nicotinate-nucleotide adenylyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DND A M11 G12 G13 T14 H22 T43 Y88 T89 T109 G110 D112 W120 R137 M8 G9 G10 T11 H19 T40 Y80 T81 T101 G102 D104 W112 R129
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004515 nicotinate-nucleotide adenylyltransferase activity
GO:0005524 ATP binding
GO:0016779 nucleotidyltransferase activity
GO:0070566 adenylyltransferase activity
Biological Process
GO:0009058 biosynthetic process
GO:0009165 nucleotide biosynthetic process
GO:0009435 NAD biosynthetic process
GO:0019363 pyridine nucleotide biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5deo, PDBe:5deo, PDBj:5deo
PDBsum5deo
PubMed
UniProtB1MMZ4

[Back to BioLiP]