Structure of PDB 5db4 Chain A

Receptor sequence
>5db4A (length=179) Species: 561007 (Mycobacteroides abscessus ATCC 19977) [Search protein sequence]
RRRLGVMGGTFDPIHNGHLVAASEVADRFALDEVIFVPTGQRKVSPAEHR
YLMTVIATASNPRFTVSRADIDRGGATYTVDTLTDLRTAHPDADLYFITG
ADALASILSWENWEQLFTLAKFIGVSRPGYELSGLSLVEVPALAISSTDC
RIRAGQARPIWYLVPDGVVQYVAKHRLYS
3D structure
PDB5db4 Mycobacterium abscessus NadD in complex with Mg-ATP, space group I41
ChainA
Resolution2.28 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.7.18: nicotinate-nucleotide adenylyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ATP A G12 G13 T14 H19 H22 T109 G110 D112 A113 R137 S168 S169 T170 R173 G8 G9 T10 H15 H18 T99 G100 D102 A103 R127 S146 S147 T148 R151
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004515 nicotinate-nucleotide adenylyltransferase activity
GO:0005524 ATP binding
GO:0016779 nucleotidyltransferase activity
GO:0070566 adenylyltransferase activity
Biological Process
GO:0009058 biosynthetic process
GO:0009165 nucleotide biosynthetic process
GO:0009435 NAD biosynthetic process
GO:0019363 pyridine nucleotide biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5db4, PDBe:5db4, PDBj:5db4
PDBsum5db4
PubMed
UniProtB1MMZ4

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