Structure of PDB 5d9i Chain A

Receptor sequence
>5d9iA (length=133) [Search protein sequence]
GSKVEDPKDFPSELLSFLSHAVFSNRTLACFAIYTTKEKAALLYKKIMEK
YSVTFISRHNSYNHNILFFLTPHRHRVSAINNYAQKLCTFSFLICKGVNK
EYLMYSALTRDPFSVIEESLPGGLKEHDFNPES
3D structure
PDB5d9i Structure-based analysis of the interaction between the simian virus 40 T-antigen origin binding domain and single-stranded DNA.
ChainA
Resolution1.7 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.6.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A R154 T155 R202 R26 T27 R74
Gene Ontology
Molecular Function
GO:0003688 DNA replication origin binding
Biological Process
GO:0006260 DNA replication

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5d9i, PDBe:5d9i, PDBj:5d9i
PDBsum5d9i
PubMed20980496
UniProtP03070|LT_SV40 Large T antigen

[Back to BioLiP]