Structure of PDB 5d79 Chain A

Receptor sequence
>5d79A (length=498) Species: 3702 (Arabidopsis thaliana) [Search protein sequence]
HEDFLKCLSYTVEPKVIHTSKDSSFFSILDSSIQNPRFSVSETPKPVSII
TPVKASDVQTVIRCAQLHGIHVRTRSAGHCYEGLSYIAYNKPFAVIDLRN
LRSISLDVDNRTGWVQTGATAGELYYEIGKTTKSLAFPAGIHPTVGVGGQ
FSGGGYGTLLRKYGLAADNIIDALVVDASGRILDRQAMGEDYFWAIRGGG
GSSFGVILSWKVKLVDVPSTITVFKVQKTSKKEAVRIIKKWQYAADKVPD
DLFIRTTLERSNKNAVHALFTGLYIGPVNNLLALMEEKFPELGLEKEGCE
EMSWIESVLWFADFPKGESLGVLTNRERTSLSFKGKDDFVQEPIPEAAIQ
EIWRRLEAPEARLGKIILTPFGGKMSEMAEYETPFPHRGGNLYEIQYVAY
WREEEDKNKTETDKYLKWVDSVYEFMTPYVSKSPRGAYVNFKDMDLGMYL
GKKKTKYEEGKSWGVKYFKNNFERLVRVKTRVDPTDFFCDEQSIPLVN
3D structure
PDB5d79 Structure of a Berberine Bridge Enzyme-Like Enzyme with an Active Site Specific to the Plant Family Brassicaceae.
ChainA
Resolution1.849 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.1.1.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CL A G172 H174 G140 H142
BS02 FAD A T106 S108 A109 G110 H111 C112 Y113 S117 T149 H174 V177 G178 G180 G181 Q182 Y188 G233 S234 I239 Y470 N472 F473 T74 S76 A77 G78 H79 C80 Y81 S85 T117 H142 V145 G146 G148 G149 Q150 Y156 G201 S202 I207 Y438 N440 F441
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0050660 flavin adenine dinucleotide binding
GO:0071949 FAD binding

View graph for
Molecular Function
External links
PDB RCSB:5d79, PDBe:5d79, PDBj:5d79
PDBsum5d79
PubMed27276217
UniProtQ9FI21|BBE28_ARATH Berberine bridge enzyme-like 28 (Gene Name=At5g44440)

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