Structure of PDB 5cy7 Chain A

Receptor sequence
>5cy7A (length=171) Species: 291331 (Xanthomonas oryzae pv. oryzae KACC 10331) [Search protein sequence]
MIRDIIRMGDKRLLRVAPQVTNLGSAELHALVSDMFETMGAAHGVGLAAP
QIAVDLQLMVFGFEASERYPEAPAVPLTALANAQIEPLSDEMENGWEGCL
SIPGLRAVIPRYRYIRYRGFAPDGSPIEREAEGFHARVVQHEYDHLVGRL
YPSRIENFDTFGFDDVLSYDL
3D structure
PDB5cy7 Structure of Xoo1075, a peptide deformylase from Xanthomonas oryze pv oryze, in complex with fragment 275
ChainA
Resolution2.4 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G46 Q51 C99 L100 H141 E142 H145
Catalytic site (residue number reindexed from 1) G46 Q51 C99 L100 H141 E142 H145
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 56U A V45 R68 Y69 G98 C99 H141 V45 R68 Y69 G98 C99 H141
Gene Ontology
Molecular Function
GO:0042586 peptide deformylase activity

View graph for
Molecular Function
External links
PDB RCSB:5cy7, PDBe:5cy7, PDBj:5cy7
PDBsum5cy7
PubMed
UniProtQ5H3Z2

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