Structure of PDB 5cvq Chain A

Receptor sequence
>5cvqA (length=158) Species: 291331 (Xanthomonas oryzae pv. oryzae KACC 10331) [Search protein sequence]
MIRDIIRMGDKRLLRVAPQVTNLGSAELHALVSDMFETMGAAHGVGLAAP
QIAVDLQLMVFGFPAVPLTALANAQIEPLSDEMENGWEGCLSIPGLRAVI
PRYRYIRYRGFAPDGSPIEREAEGFHARVVQHEYDHLVGRLYPSRIENFD
TFGFDDVL
3D structure
PDB5cvq Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryzae, in complex with actinonin
ChainA
Resolution2.5 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G46 Q51 C99 L100 H141 E142 H145
Catalytic site (residue number reindexed from 1) G46 Q51 C90 L91 H132 E133 H136
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BB2 A G44 V45 G46 Q51 W96 E97 G98 C99 L100 R106 R137 H141 E142 H145 G44 V45 G46 Q51 W87 E88 G89 C90 L91 R97 R128 H132 E133 H136
Gene Ontology
Molecular Function
GO:0042586 peptide deformylase activity

View graph for
Molecular Function
External links
PDB RCSB:5cvq, PDBe:5cvq, PDBj:5cvq
PDBsum5cvq
PubMed
UniProtQ5H3Z2

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