Structure of PDB 5cvp Chain A

Receptor sequence
>5cvpA (length=166) Species: 291331 (Xanthomonas oryzae pv. oryzae KACC 10331) [Search protein sequence]
MIRDIIRMGDKRLLRVAPQVTNLGSAELHALVSDMFETMGAAHGVGLAAP
QIAVDLQLMVFGFEAEAPAVPLTALANAQIEPLSDEMENGWEGCLSIPGL
RAVIPRYRYIRYRGFAPDGSPIEREAEGFHARVVQHEYDHLVGRLYPSRI
ENFDTFGFDDVLSYDL
3D structure
PDB5cvp Structure of Xoo1075, a peptide deformylase from Xanthomonas oryzae pv oryze, in complex with fragment 571
ChainA
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G46 Q51 C99 L100 H141 E142 H145
Catalytic site (residue number reindexed from 1) G46 Q51 C94 L95 H136 E137 H140
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 56F A W96 E97 G98 F134 H141 W91 E92 G93 F129 H136
Gene Ontology
Molecular Function
GO:0042586 peptide deformylase activity

View graph for
Molecular Function
External links
PDB RCSB:5cvp, PDBe:5cvp, PDBj:5cvp
PDBsum5cvp
PubMed
UniProtQ5H3Z2

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