Structure of PDB 5cl6 Chain A

Receptor sequence
>5cl6A (length=231) Species: 1396 (Bacillus cereus) [Search protein sequence]
VPMHPFVKALQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKD
IIQIHTLPDQKDFQIIIRELWDLPEREFQAAALDIMQKYKKHINETHIPF
LEELIVTKSWWDSVDSIVPTFLGDIFLKHPELISAYIPKWIASDNIWLQR
AAILFQLKYKQKMDEELLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPD
VVWEYVQNNELAPLSKREAIKHIKQNYGINN
3D structure
PDB5cl6 The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions.
ChainA
Resolution1.541 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.2.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A Y27 W109 R148 K183 W187 R190 K194 H220 Y29 W111 R150 K185 W189 R192 K196 H222
BS02 dna A T39 R43 R215 T41 R45 R217
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5cl6, PDBe:5cl6, PDBj:5cl6
PDBsum5cl6
PubMed26524531
UniProtQ816E8

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