Structure of PDB 5c8f Chain A

Receptor sequence
>5c8fA (length=274) Species: 262724 (Thermus thermophilus HB27) [Search protein sequence]
GVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAEDVEALK
TIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGAEALFR
RGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLRARLQE
LLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLGPDTPL
PDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQGAGPE
EARRLGAEYMEDLKGLAEALWLPR
3D structure
PDB5c8f Structural basis for gene regulation by a B12-dependent photoreceptor.
ChainA
Resolution2.65 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 B12 A R125 G128 W131 H132 R176 H177 E178 I179 G180 S222 L225 G247 G248 Q249 M264 D266 L267 R121 G124 W127 H128 R172 H173 E174 I175 G176 S218 L221 G243 G244 Q245 M260 D262 L263
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0031419 cobalamin binding
GO:0042802 identical protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:5c8f, PDBe:5c8f, PDBj:5c8f
PDBsum5c8f
PubMed26416754
UniProtQ746J7

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