Structure of PDB 5bvc Chain A

Receptor sequence
>5bvcA (length=433) Species: 29829 (Lipomyces starkeyi) [Search protein sequence]
NVLDFTVLGLNSGTSMDGIDCALCHFYQKTPDAPMEFELLEYGEVPLAQP
IKQRVMRMILEDTTSPSELSEVNVILGEHFADAVRQFAAERNVDLSTIDA
IASHGQTIWLLSMPEEGQVKSALTMAEGAILASRTGITSITDFRISDQAA
GRQGAPLIAFFDALLLHHPTKLRACQNIGGIANVCFIPPDVDGRRTDEYY
DFDTGPGNVFIDAVVRHFTNGEQEYDKDGAMGKRGKVDQELVDDFLKMPY
FQLDPPKTTGREVFRDTLAHDLIRRAEAKGLSPDDIVATTTRITAQAIVD
HYRRYAPSQEIDEIFMCGGGAYNPNIVEFIQQSYPNTKIMMLDEAGVPAG
AKEAITFAWQGMEALVGRSIPVPTRVETRQHYVLGKVSPGLNYRSVMKKG
MAFGGDAQQLPWVSEMIVKKKGKVITNNWAGSH
3D structure
PDB5bvc Producing Glucose 6-Phosphate from Cellulosic Biomass: STRUCTURAL INSIGHTS INTO LEVOGLUCOSAN BIOCONVERSION.
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.7.1.232: levoglucosan kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A G22 S24 N217 D221 Y234 D237 G328 G13 S15 N208 D212 Y225 D228 G319
BS02 4PW A R153 P165 I190 N192 D212 R144 P156 I181 N183 D203
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0016773 phosphotransferase activity, alcohol group as acceptor
GO:0046872 metal ion binding
Biological Process
GO:0006040 amino sugar metabolic process
GO:0009254 peptidoglycan turnover
GO:0016310 phosphorylation

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Molecular Function
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Biological Process
External links
PDB RCSB:5bvc, PDBe:5bvc, PDBj:5bvc
PDBsum5bvc
PubMed26354439
UniProtB3VI55|LGK_LIPST Levoglucosan kinase

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