Structure of PDB 5bst Chain A

Receptor sequence
>5bstA (length=529) Species: 4097 (Nicotiana tabacum) [Search protein sequence]
VDIIFRSKLPDIYIPNHLPLHSYCFENISEFSSRPCLINGANKQIYTYAD
VELNSRKVAAGLHKQGIQPKDTIMILLPNSPEFVFAFIGASYLGAISTMA
NPLFTPAEVVKQAKASSAKIIVTQACHVNKVKDYAFENDVKIICIDSAPE
GCLHFSVLTQANEHDIPEVEIQPDDVVALPYSSGTTGLPKGVMLTHKGLV
TSVAQQVDGENPNLYIHSEDVMLCVLPLFHIYSLNSVLLCGLRVGAAILI
MQKFDIVSFLELIQRYKVTIGPFVPPIVLAIAKSPMVDDYDLSSVRTVMS
GAAPLGKELEDTVRAKFPNAKLGQGYGMTEAGPVLAMCLAFAKEPFEIKS
GACGTVVRNAEMKIVDPKTGNSLPRNQSGEICIRGDQIMKGYLNDPEATA
RTIDKEGWLYTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLL
NHPNISDAAVVPMKDEQAGEVPVAFVVRSNGSTITEDEVKDFISKQVIFY
KRIKRVFFVDAIPKSPSGKILRKDLRAKL
3D structure
PDB5bst Structural Basis for Specificity and Flexibility in a Plant 4-Coumarate:CoA Ligase.
ChainA
Resolution1.61 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) S189 S209 H237 T336 E337 K441 Q446 K526
Catalytic site (residue number reindexed from 1) S182 S202 H230 T329 E330 K434 Q439 K519
Enzyme Commision number 6.2.1.-
6.2.1.12: 4-coumarate--CoA ligase.
6.2.1.34: trans-feruloyl-CoA synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 4UU A H237 Y239 S243 A309 A310 P311 G332 Y333 G334 M335 T336 P340 V341 D420 K437 K441 Q446 H230 Y232 S236 A302 A303 P304 G325 Y326 G327 M328 T329 P333 V334 D413 K430 K434 Q439
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0005524 ATP binding
GO:0016207 4-coumarate-CoA ligase activity
GO:0016405 CoA-ligase activity
GO:0016874 ligase activity
GO:0050563 trans-feruloyl-CoA synthase activity
GO:0106286 (E)-caffeate-CoA ligase activity
GO:0106290 trans-cinnamate-CoA ligase activity
Biological Process
GO:0009611 response to wounding
GO:0009698 phenylpropanoid metabolic process
GO:0009753 response to jasmonic acid

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Molecular Function
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Biological Process
External links
PDB RCSB:5bst, PDBe:5bst, PDBj:5bst
PDBsum5bst
PubMed26412334
UniProtO24146|4CL2_TOBAC 4-coumarate--CoA ligase 2 (Gene Name=4CL2)

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