Structure of PDB 5b6c Chain A

Receptor sequence
>5b6cA (length=174) Species: 9606 (Homo sapiens) [Search protein sequence]
GSNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAV
CIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLP
IDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVET
DPSPYCIVAPDTVIHCEGEPIKRA
3D structure
PDB5b6c Structural Details of Ufd1 Binding to p97 and Their Functional Implications in ER-Associated Degradation
ChainA
Resolution1.55 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.6.4.6: vesicle-fusing ATPase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A R113 I114 H115 F131 V166 E167 V181 I182 H183 R95 I96 H97 F113 V148 E149 V163 I164 H165
External links
PDB RCSB:5b6c, PDBe:5b6c, PDBj:5b6c
PDBsum5b6c
PubMed27684549
UniProtP55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase (Gene Name=VCP)

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