Structure of PDB 4zpn Chain A

Receptor sequence

>4zpnA (length=320) Species: 10090 (Mus musculus) [Search protein sequence]

GWVSGQLRYSVVEESEPGTLVGNVAQDLGLKGTDLLSRRLRLGSEENGRY
FSLSLVSGALAVSQKIDRESLCGASTSCLLPVQVVTEHPLELTRVEVEIL
DLNDNSPSFATPDREMRISESAAPGARFPLDSAQDPDVGTNTVSFYTLSP
NSHFSLHVKTLKDGKLFPELVLEQQLDRETQARHQLVLTAVDGGTPARSG
TSLISVIVLDVNDNAPTFQSSVLRVGLPENTPPGTLLLRLNATDPDEGTN
GQLDYSFGDHTSETVKNLFGLDPSSGAIHVLGPVDFEESNFYEIHARARD
QGQPAMEGHCVIQVDVGDAN

3D structure

PDB

4zpn Molecular Logic of Neuronal Self-Recognition through Protocadherin Domain Interactions.

Chain

Resolution

3.3 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	FUC	A	D244 G251	D244 G251
BS02	CA	A	N212 N214 D244 D246 N250 D300	N212 N214 D244 D246 N250 D300
BS03	CA	A	E120 D177 E179 D213	E120 D177 E179 D213
BS04	CA	A	E120 E179 D210 V211 D213 D246	E120 E179 D210 V211 D213 D246
BS05	CA	A	N103 N105 D135 D137 N141 D192	N103 N105 D135 D137 N141 D192
BS06	CA	A	E13 E69 D101 L102 D104 D137	E13 E69 D101 L102 D104 D137
BS07	CA	A	E13 D67 E69 D104	E13 D67 E69 D104
BS08	CA	A	D285 E287 A319	D285 E287 A319
BS09	MAN	A	A197 S199	A197 S199
BS10	MAN	A	L71 C72	L71 C72

Gene Ontology

	Molecular Function
GO:0005509	calcium ion binding

	Biological Process
GO:0007155	cell adhesion
GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules

	Cellular Component
GO:0005886	plasma membrane
GO:0016020	membrane

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:4zpn, PDBe:4zpn, PDBj:4zpn
PDBsum	4zpn
PubMed	26478182
UniProt	Q91XW9

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