Structure of PDB 4zng Chain A

Receptor sequence
>4zngA (length=362) Species: 1358 (Lactococcus lactis) [Search protein sequence]
MSKIERISAFLNDKEVDMTFITNPTTLNYLTGLAIDPHERIAGLMIFRDS
TPMLFTPALEVEKAKEHTSGLDIFGYEDSQNPWEVVKNHVKSDVKSIAVE
FSDIPLAKTEGLKAQFGDINFVNLTPLIERMRLIKSADEIEKMKVAGDFA
DKCFEIGFATAAERNGVTESDIVAKIEYEMKRMGVPQMSFDTLVLSGARA
ANPHGAPENVEIQENKLLLFDLGVMSGGYASDATRTIAIGQPNDFDAEIH
KIVKEAQQAAMDFIKPGVTAHEVDAVARDLITKAGYGEYFNHRLGHGIGM
DVHEYPSIVAGNDLVIQEGMCFSNEPGIYIPGKVGVRIEDCLYVTENGCE
SFTHTDHDLLIF
3D structure
PDB4zng X-ray crystallography of recombinant Lactococcus lactis prolidase
ChainA
Resolution2.25 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H204 D221 D232 T234 H292 H296 H303 E325 Y329 R337 E339
Catalytic site (residue number reindexed from 1) H204 D221 D232 T234 H292 H296 H303 E325 Y329 R337 E339
Enzyme Commision number 3.4.13.9: Xaa-Pro dipeptidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MN A D232 H296 E325 E339 D232 H296 E325 E339
BS02 MN A D221 D232 E339 D221 D232 E339
Gene Ontology
Molecular Function
GO:0004177 aminopeptidase activity
GO:0016805 dipeptidase activity
GO:0046872 metal ion binding
GO:0102009 proline dipeptidase activity

View graph for
Molecular Function
External links
PDB RCSB:4zng, PDBe:4zng, PDBj:4zng
PDBsum4zng
PubMed
UniProtA8WBX8

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