Structure of PDB 4zek Chain A

Receptor sequence
>4zekA (length=490) Species: 176299 (Agrobacterium fabrum str. C58) [Search protein sequence]
RRALRLGVNGLPNSLEPVNAISNVGPRIVNQIFDTLIARDFFAKGAPGNA
IDLVPALAESWERIDEKSVRFKLRQKVMFHDGVELTADDVAYTFSSERLW
GPEAIKKIPLGKSYSLDFDEPVVEDKYTVTLRTKTPSYLIETFVASWMSR
IVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAYWGPKPT
ASKITYQIVAEPATRVAGLISGEYDIITTLTPDDIQLINSYPDLETRGTL
IENFHMFTFNMNQEVFKDKKLRRALALAVNRPIMVEALWKKQASIPAGFN
FPNYGETFDPKRKAMEYNVEEAKRLVKESGYDGTPITYHTMGNYYANAMP
ALMMMIEMWKQIGVNVVMKTYAPGSFPPDNQTWMRNWSNGQWMTDAYATI
VPEFGPNGQVQKRWGWKAPAEFNELCQKVTVLPNGKERFDAYNRMRDIFE
EEAPAVILYQPYDVYAARKDVHWKPVSFEMMEFRNNLSFG
3D structure
PDB4zek A Pyranose-2-Phosphate Motif Is Responsible for Both Antibiotic Import and Quorum-Sensing Regulation in Agrobacterium tumefaciens.
ChainA
Resolution2.09 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 LAH A S53 N54 W178 Y375 Y376 W418 S419 N420 G421 E434 E510 S22 N23 W147 Y344 Y345 W387 S388 N389 G390 E403 E479 PDBbind-CN: -logKd/Ki=5.66,Kd=2.2uM
Gene Ontology
Molecular Function
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015833 peptide transport
GO:0055085 transmembrane transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4zek, PDBe:4zek, PDBj:4zek
PDBsum4zek
PubMed26244338
UniProtQ52012

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