Structure of PDB 4yy1 Chain A

Receptor sequence
>4yy1A (length=325) Species: 119212 (H6N1 subtype) [Search protein sequence]
DKICIGYHANNSTTQVDTLLEKNVTVTHSVELLENQKEKRFCKIMNKAPL
DLKDCTIEGWILGNPKCDLLLGDQSWSYIVERPNAQNGICYPGVLNELEE
LKAFIGSGERVERFEMFPKSTWAGVDTSRGVTNACPSYTLDSSFYRNLVW
LVKTDSATYPVIKGTYNNTGTQPILYFWGVHHPPDTTVQDNLYGSGDKYV
RMGTESMNFAKSPEIAARPAVNGQRSRIDYYWSVLRPGETLNVESNGNLI
APWYAYKFVSTNKKGAVFKSDLPIENCDATCQTIAGVLKTNKTFQNVSPL
WIGECPKYVKSESLRLATGLRNVPQ
3D structure
PDB4yy1 Structure of hemagglutinin from a H6N1 influenza virus (A/chicken/Taiwan/A2837/2013)
ChainA
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL A N133 G223 N133 G223
BS02 SIA A Y91 R129 V131 T132 N133 Q224 S226 Y91 R129 V131 T132 N133 Q224 S226
Gene Ontology
Molecular Function
GO:0046789 host cell surface receptor binding
Biological Process
GO:0019062 virion attachment to host cell
GO:0019064 fusion of virus membrane with host plasma membrane
GO:0039654 fusion of virus membrane with host endosome membrane
GO:0046718 symbiont entry into host cell
GO:0075512 clathrin-dependent endocytosis of virus by host cell
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016324 apical plasma membrane
GO:0019031 viral envelope
GO:0020002 host cell plasma membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4yy1, PDBe:4yy1, PDBj:4yy1
PDBsum4yy1
PubMed
UniProtA0A0J9X268

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