Structure of PDB 4yov Chain A

Receptor sequence
>4yovA (length=226) Species: 53953 (Pyrococcus horikoshii) [Search protein sequence]
MRIVAADTGGAVLDESFQPVGLIATVAVLVEKPYKTSKRFLVKYADPYNY
DLSGRQAIRDEIELAIELAREVSPDVIHLNSTLGGIEVRKLDESTIDALQ
ISDRGKEIWKELSKDLQPLAKKFWEETGIEIIAIGKSSVPVRIAEIYAGI
FSVKWALDNVGGLLVGLPRYMEVEIKKDKIIGKSLDPREGGLYGEVKTEV
PQGIKWELYPNPLVRRFMVFEITSKS
3D structure
PDB4yov Structural basis for substrate recognition and processive cleavage mechanisms of the trimeric exonuclease PhoExo I
ChainA
Resolution2.05 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A G9 A11 R55 N80 S81 T82 I101 S102 G169 L170 P171 V217 F220 G9 A11 R55 N80 S81 T82 I101 S102 G166 L167 P168 V214 F217
Gene Ontology
Molecular Function
GO:0004527 exonuclease activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:4yov, PDBe:4yov, PDBj:4yov
PDBsum4yov
PubMed26138487
UniProtA0A060P168

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