Structure of PDB 4yfb Chain A

Receptor sequence
>4yfbA (length=168) Species: 1268622 (Acidovorax sp. MR-S7) [Search protein sequence]
STYSAEIRRTTMGVPHIKAGNWGSAGYGFGYVQAQDNLCTMADSFLTYRG
ERSRHLGGSAQLVYNSTLGRPRNIDSDFFHRHVISDEAVDRTMAAQPAKL
LQMVEGFAAGYNRYVREAKAGGSAHAACRSEAWVQPITARDVWRRIYAAN
LAGGYSNFAEAIANAQPP
3D structure
PDB4yfb Bifunctional quorum-quenching and antibiotic-acylase MacQ forms a 170-kDa capsule-shaped molecule containing spacer polypeptides
ChainA
Resolution1.75 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A R82 Q176 R72 Q166
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Biological Process
GO:0017000 antibiotic biosynthetic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4yfb, PDBe:4yfb, PDBj:4yfb
PDBsum4yfb
PubMed28827579
UniProtA0A0A1VBK6

[Back to BioLiP]