Structure of PDB 4v08 Chain A

Receptor sequence
>4v08A (length=213) Species: 10345 (Suid alphaherpesvirus 1) [Search protein sequence]
MGPVYVSGYLALYDRDGGELALTREIVAAALPPAGPLPINIDHRPRCDIG
AVLAVVDDDRGPFFLGVVNCPQLGAVLARAVGPDFFGDMRLSDEERLLYL
LSNYLPSASLSSRRAPDETLFAHVALCVIGRRVGTIVVYDASPEAAVAPF
RQLSARARSELLARAAESPDRERVWHMSEEALTRALLSTAVNNMLLRDRW
ELVAARRREAGVR
3D structure
PDB4v08 Dimerization-Induced Allosteric Changes of the Oxyanion-Hole Loop Activate the Pseudorabies Virus Assemblin Pul26N, a Herpesvirus Serine Protease
ChainA
Resolution2.03 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H43 S109 S111 H128 R136 R137
Catalytic site (residue number reindexed from 1) H43 S109 S111 H123 R131 R132
Enzyme Commision number 3.4.21.97: assemblin.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 DFP A S109 L110 G135 R136 S109 L110 G130 R131
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:4v08, PDBe:4v08, PDBj:4v08
PDBsum4v08
PubMed26161660
UniProtQ83417|SCAF_SUHVK Capsid scaffolding protein

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