Structure of PDB 4utf Chain A

Receptor sequence
>4utfA (length=349) Species: 657309 (Bacteroides xylanisolvens XB1A) [Search protein sequence]
NNLGTELDYDTFCFYYDWYGSEAIDGQYRHWAHAIAPDPNGGSGQNPGTI
PGTQESIASNFYPQLGRYSSSDPNILTKHMDMFVMARTGVLALTWWNEQD
ETEAKRIGLILDAADKKKIKVCFHLEPYPSRNVQNLRENIVKLITRYGNH
PAFYRKDGKPLFFIYDSYLIEPSEWEKLLSPGGSITIRNTAYDALMIGLW
TSSPTVQRPFILNAHFDGFYTYFAATGFTYGSTPTNWVSMQKWAKENGKI
FIPSVGPGYIDTRIRPWNGSVIRTRTDGQYYDAMYRKAIEAGVSAISITS
FNEWHEGSQIEPAVPYTSSEFTYLDYENREPDYYLTRTAYWVGKFRESK
3D structure
PDB4utf Human Gut Bacteroidetes Can Utilize Yeast Mannan Through a Selfish Mechanism.
ChainA
Resolution1.3 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.130: glycoprotein endo-alpha-1,2-mannosidase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MAN A Y195 D196 Y198 F253 F258 Y165 D166 Y168 F223 F228
BS02 MAN A F258 Y289 R295 F228 Y259 R265
BS03 MAN A H63 R295 E333 E336 H33 R265 E303 E306
BS04 IFM A Y46 W126 H154 E156 Y195 Y252 E333 E336 Y16 W96 H124 E126 Y165 Y222 E303 E306
Gene Ontology
Molecular Function
GO:0004559 alpha-mannosidase activity
GO:0016787 hydrolase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:4utf, PDBe:4utf, PDBj:4utf
PDBsum4utf
PubMed25567280
UniProtD6D1V7

[Back to BioLiP]