Structure of PDB 4ur8 Chain A

Receptor sequence
>4ur8A (length=304) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence]
MDPEQIKTALGSGLLSFPVTHFDAEGRFAADSYREHVEWLAGYKAPVLFA
AGGTGEFFSLKPDEIPTIVAAAKEVAGETAIVSGCGYGTEIAVDIARSVE
KVGADGILLLPHYLIDAPQEGLYAHIKKVCQSVGIGVMVYNRDNSVLQAD
TLARLCDECPNLVGFKDGTGDIGLVRQITAKMGDRLMYLGGMPTAELFAE
AYLGAGFTTYSSAVFNFVPGLANEFYAALRAGERATCERILVDFFYPFMA
IRNRAKGYAVSAVKAGVRLQGFNAGPVRAPLKDLTNEEIGMLEALIGTHK
RKAW
3D structure
PDB4ur8 Structure and Function of a Decarboxylating Agrobacterium Tumefaciens Keto-Deoxy-D-Galactarate Dehydratase.
ChainA
Resolution2.097 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G53 L114 Y140 K166 S211
Catalytic site (residue number reindexed from 1) G53 L114 Y140 K166 S211
Enzyme Commision number 4.2.1.41: 5-dehydro-4-deoxyglucarate dehydratase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 OOG A F17 G53 T54 Y140 K166 F17 G53 T54 Y140 K166
Gene Ontology
Molecular Function
GO:0008840 4-hydroxy-tetrahydrodipicolinate synthase activity
GO:0016829 lyase activity
GO:0047448 5-dehydro-4-deoxyglucarate dehydratase activity
Biological Process
GO:0016052 carbohydrate catabolic process
GO:0042838 D-glucarate catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:4ur8, PDBe:4ur8, PDBj:4ur8
PDBsum4ur8
PubMed25454257
UniProtQ8UB77|KDGD_AGRFC Probable 5-dehydro-4-deoxyglucarate dehydratase (Gene Name=Atu3140)

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